Genomics
From Microorganisms To Human Dna
For many years, genomics has been focused on microorganisms, which have relatively small genomes. However, more recently the field has been energized by the advent of more industrialized, higher-throughput sequencing technologies. By 2001 more than seventy organisms had been completely sequenced, and a working draft of the human genome had been produced. Vigorous efforts have now been initiated to map the mouse genome, and one company already claims to have completed the sequence. From the description of the structure of the genetic material by James Watson and Francis Crick in 1953, it will have taken only about fifty years to determine the complete genetic codes of humans and most of the model organisms that are important in biological research.
Latin Name | Common Name | Genome Size |
Eukaryotes (haploid genome) | ||
Oryza sativa | Rice | 420,000 Kb |
Homo sapiens | Human | 3,200,000 Kb |
Arabidopsis thaliana | Mustard cress | 115,428 Kb |
Drosophila melanogaster | Fruit fly | 137,000 Kb |
Caenorhabditis elegans | Roundworm | 97,000 Kb |
Saccharomyces cerevisiae | Yeast | 12,069 Kb |
Eubacteria | ||
Haemophilus influenzae | - | 1,830 Kb |
Escherichia coli | Human colon bacterium | 4,639 Kb |
Helicobacter pylori | Stomach ulcer bacterium | 1,667 Kb |
Mycobacterium | Tuberculosis | 4,411 Kb |
Yersinia pestis | Plague | 4,653 Kb |
Archaea | ||
Halobacterium | Salt-tolerant archaean | 2,014 Kb |
Methanobacterium thermoautotrophicum | Methane-producing archaean | 1,751 Kb |
Kb=one thousand base pairs |
Of what value is the knowledge of these genomes? How are they being used within the scientific community? The first fully sequenced genomes included the fruit fly, a worm, and a number of bacteria and yeast. One of the first analyses performed was to simply compare the sequences between organisms, in order to identify what is shared in common and what is different. This allows the very specific comparison of organisms that will enable the refining of phylogenic relationships. This kind of information is also very valuable for asking questions about how organisms have evolved, how they adapt to different circumstances, and what gene products contribute to their survival in various environmental conditions.
Additional topics
Medicine EncyclopediaGenetics in Medicine - Part 2Genomics - From Microorganisms To Human Dna, Applications, The Human Genome Project And Future Research